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IB DP Biology Study Notes

8.2.1 Glycolysis and ATP Production

Glycolysis is a paramount metabolic pathway that converts glucose to pyruvate, producing ATP for energy. It functions under aerobic and anaerobic conditions, and plays a pivotal role in various organisms from bacteria to humans.

The Process of Glycolysis

Glycolysis consists of ten enzymatic reactions divided into three phases. Let's explore each phase and the corresponding reactions:

Energy Investment Phase

1. Glucose Activation

  • Reaction: Glucose is phosphorylated to glucose-6-phosphate.
  • Enzyme: Hexokinase.
  • Significance: Phosphorylation "traps" the glucose in the cell and prepares it for further reactions.
  • Energy Cost: Consumes one ATP.

2. Isomerisation

  • Reaction: Glucose-6-phosphate is rearranged to fructose-6-phosphate.
  • Enzyme: Phosphoglucose isomerase.
  • Significance: This prepares the molecule for the next phosphorylation step.

3. Second Phosphorylation

  • Reaction: Fructose-6-phosphate to fructose-1,6-bisphosphate.
  • Enzyme: Phosphofructokinase (a key regulatory step).
  • Significance: Prepares the sugar for cleavage into two three-carbon molecules.
  • Energy Cost: Consumes another ATP.

Cleavage Phase

4. Cleavage of Fructose-1,6-bisphosphate

  • Reaction: Splitting into glyceraldehyde-3-phosphate (G3P) and dihydroxyacetone phosphate (DHAP), which is converted into another G3P.
  • Enzyme: Aldolase.
  • Significance: Forms two molecules that can enter the energy generation phase.

Energy Generation Phase

5. Oxidation and Phosphorylation of G3P

  • Reaction: Oxidation of G3P to 1,3-bisphosphoglycerate.
  • Enzyme: Glyceraldehyde-3-phosphate dehydrogenase.
  • Significance: Produces NADH, a valuable electron carrier.

6. First ATP Production

  • Reaction: Formation of ATP and 3-phosphoglycerate.
  • Enzyme: Phosphoglycerate kinase.
  • Significance: The first step in recouping the ATP investment.

7. Rearrangement to 2-phosphoglycerate

  • Reaction: 3-phosphoglycerate is rearranged.
  • Enzyme: Phosphoglycerate mutase.
  • Significance: Prepares the molecule for dehydration.

8. Dehydration to Phosphoenolpyruvate (PEP)

  • Reaction: Formation of PEP.
  • Enzyme: Enolase.
  • Significance: Prepares PEP for the final ATP-producing reaction.

9. Second ATP Production

  • Reaction: PEP to pyruvate, producing ATP.
  • Enzyme: Pyruvate kinase.
  • Significance: The final ATP-yielding step, providing a net gain of ATP.

Products of Glycolysis

  • 2 ATP: Net gain.
  • 2 NADH: Electron carriers for later stages.
  • 2 Pyruvate: Feed into the link reaction if oxygen is present.

Glycolysis under Anaerobic Conditions

Lactic Acid Fermentation in Muscles

  • Reaction: Pyruvate to lactate.
  • Enzyme: Lactate dehydrogenase.
  • Significance: Regenerates NAD+ to allow glycolysis to continue.

Alcoholic Fermentation in Yeast

  • Reaction: Pyruvate to ethanol.
  • Enzymes: Pyruvate decarboxylase and alcohol dehydrogenase.
  • Significance: Also regenerates NAD+ and enables continuous glycolysis.

Significance of Glycolysis During Energy Demand

Glycolysis's flexibility and rapid ATP generation make it indispensable:

  • Quick ATP Production: For short, intense bursts of activity.
  • Anaerobic Capability: Vital in oxygen-limited conditions.
  • Universal Presence: Found in virtually all organisms.
  • Integration with Other Pathways: Interacts with gluconeogenesis, the pentose phosphate pathway, and more.

FAQ

Under aerobic conditions, pyruvate produced in glycolysis is transported into the mitochondria. Here, it undergoes the link reaction, being converted into acetyl CoA, which enters the Krebs cycle. This process is part of aerobic respiration, allowing more energy to be extracted from the glucose molecule.

Glycolysis is regulated through the activity of specific enzymes, such as hexokinase, phosphofructokinase, and pyruvate kinase. These enzymes are influenced by several factors, including ATP levels, pH, and concentrations of intermediates like citrate. This allows the cell to control glycolysis based on its energy needs and other metabolic conditions.

In yeast cells, during anaerobic respiration, the NADH produced in glycolysis is used to reduce pyruvate to ethanol in the process of alcoholic fermentation. This regenerates NAD+, allowing glycolysis to continue producing ATP in the absence of oxygen.

Glycolysis is considered universal because it occurs in almost all organisms, from bacteria to humans. It represents a conserved and ancient metabolic pathway for energy production. Glycolysis occurs in the cytoplasm of the cell, and it doesn't require membrane-bound organelles or oxygen, making it accessible to various organisms.

Glycolysis contributes to metabolic flexibility by providing a pathway for glucose breakdown that can function under both aerobic and anaerobic conditions. It can feed into different metabolic pathways depending on the cell's needs, such as entering the Krebs cycle under aerobic conditions or converting to lactate or ethanol under anaerobic conditions. This flexibility allows cells to adapt to varying environmental conditions and energy demands.

Practice Questions

Explain the significance of glycolysis in anaerobic conditions, particularly in human muscle cells.

Glycolysis is significant in anaerobic conditions because it allows for the production of ATP without the presence of oxygen. In human muscle cells during strenuous exercise, oxygen supply may be limited, and glycolysis can continue to provide energy. The pyruvate formed is converted into lactate by lactate dehydrogenase, regenerating NAD+ in the process. This enables glycolysis to continue, producing 2 net ATP molecules per glucose, even when oxygen is not available. The lactate can later be transported to the liver, where it can be converted back to glucose or metabolised further.

Describe the energy investment phase of glycolysis, including the reactions, enzymes involved, and the significance of this phase.

The energy investment phase of glycolysis consists of the first three steps. First, glucose is phosphorylated by hexokinase to form glucose-6-phosphate using one ATP molecule. This "traps" the glucose in the cell. Then, glucose-6-phosphate is rearranged to fructose-6-phosphate by phosphoglucose isomerase. Lastly, phosphofructokinase phosphorylates fructose-6-phosphate to fructose-1,6-bisphosphate using another ATP molecule. The significance of this phase is to prepare the sugar for cleavage into two three-carbon molecules, as well as committing the cell to metabolise the glucose since ATP has been invested. These reactions ensure that the molecule is activated and primed for subsequent energy-yielding reactions in glycolysis.

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